Photo of male silver lyretail molly.

Fish Breeding, Introducing Recessive Gene

Photo is a male silver lyretail molly displaying a nice sailfin. This is the fish you want to create starting with a male silver sailfin molly and female green lyretail sailfin mollies

Fish Breeding, Introducing Recessive Gene

Recently I began a blog series on introducing new genes into a livebearer population. Technically the proper usage would be introducing alleles; and I’ll use “allele” properly in this blog instead of the popular usage of gene to avoid confusion, so you need to get used to it. An allele is an alternate version of a gene. For example, in humans there is a gene that controls eye color and it comes in two versions (alleles), blue and brown. There are modifier genes that change basic brown to hazel and blue to green, but there are only two basic eye color alleles. Some genes have more than two alleles.

In the first blog of the series (http://goliadfarms.com/introducing-a-dominant-gene/) I discussed the mechanics of introducing a single dominant allele into a swordtail population. This blog I’ll do the same for a recessive allele using mollies as an example. By the way, this process of introducing a recessive allele can be used in any breeding program of animals and plants.

First, let’s review what a molly is. A molly is any fish once placed in the genus Mollienesia (from whence its common name “molly” came). This genus has been combined with guppies into the genus Poecilia, which today contains 31 species, many of which aren’t common in the hobby. Some of these are available from clubs like the American Livebearer Association (www.livebearers.org). We raise some of these less common species as well.

With that background out of the way, let’s get started. Imagine you have a breeding colony of green lyretail mollies and you’ve acquired a male silver molly. And, you want to create a strain of silver lyretail mollies. How do you go about doing this?

First, you have probably correctly assumed the silver allele is recessive simply due to this blog’s title. The normal (often called “wild”) color of mollies is green or gray. Green is dominant to silver. If you mate a silver molly to a homozygous green molly, all the first generation fry will be green. Let’s discuss what is meant by homozygous and heterozygous. When the same allele is inherited from both parents an offspring is called homozygous for that gene. If two different alleles are inherited, then an offspring is heterozygous for that gene. “Homo” means same and “hetero” means different.  With that out of the way, what happens if you mate a pair of the first generation fish (geneticists call these fish F1 for first filial generation)? Since each F1 fish is heterozygous and carries the green allele and the silver allele (silver is recessive to green so these fish are green), when you mate F1s together you’ll get three kinds of fish in the F2 (second filial) generation. There will be:

  • homozygous greens, having two copies of the dominant green,
  • heterozygous greens having one green and one silver allele, and
  • homozygous silvers, having two silver alleles.

In general, three-fourths of the fish will be green and one-fourth silver. This is the traditional 3:1 ratio you get when mating organisms that are heterozygous for a dominant and its related recessive allele. We’ll come back to these matings and their results shortly.

First to make this a bit clearer let’s use the geneticist’s Punnett square and some graphics to illustrate the mating of silver molly male to a green molly female. The Punnett square (named after its inventor) is a grid used to predict the results of a cross. A Punnett square sets forth the gametes (eggs and sperm) produced by the two breeders and the offspring types resulting from the sperm fertilizing the eggs. In this mating the Punnett square is simple. The male’s gametes (sperm) are on the vertical, left side of the square and the female’s gametes (eggs) are across the top. The combination of alleles in the offspring are represented in the single cell since all the fry end up with a recessive silver (s) allele and a dominant green (G) allele since the parents are homozygous and produce only one type of gamete. Since green (G) is dominant, despite having a silver (s) allele, each fry is green.

Graphic of Punnet square for mating of silver molly to green molly.
Punnet square for mating of silver molly to homozygous green molly.

Now let’s mate the heterozygous F1 green mollies together. In this case, the Punnett square will have four cells since each fish produces two types of gametes, one for silver and one for green. Again the male’s gametes are on the right side and the female’s gametes across the top. If you count the squares, you’ll see that on average you’d get one silver fish for three green fish. I say “on average” since the two different types of sperm fertilize the two types of eggs randomly.

Graphic of Punnet square for F1 mating to produce silver mollies.
Punnet square for F1 mating of two heterozygous green mollies carrying the recessive silver allele to produce silver mollies.

In our particular set of matings, creating a silver lyretail sailfin molly, we are also dealing with another gene, one for tail type. The lyretail allele is dominant to non-lyretail, which is the normal (wild) tail type. Unlike in swordtails and platies, lyretail in mollies does not prevent males from sexually functioning. In swordtails the lyretail allele also causes the anal fin and pelvic fins to elongate. That causes the male’s gonopodium to be too long to insert sperm into the female. This is not the case in mollies and the gonopodium of a lyretail male is normal. So, a lyretail molly can be either homozygous or heterozygous for lyretail.

Okay, so what do we do with our male silver and female green lyretail mollies? First, we simplify things by raising virgin female green lyretails. That way we know their offspring will be from the silver male. Why raise virgins? We raise virgins because female Poeciliidae, which includes mollies, swords, platies, etc., can store sperm from earlier matings and have multiple batches of fry from an earlier mating. So to be sure the fry we get from the lyretail females belong to the silver male, we raise virgins. Raising virgin female Poeciliidae is a pain. Someday I’ll blog about techniques that can make it easier. By the way, if we were talking about ANY other fish than Poeciliidae we wouldn’t have worry about raising virgins because no other fish store sperm.

Things get more complicated when you are dealing with two characteristics that are inherited through entirely different genes. So, what do we know about your fish at this point? We know the silver male is homozygous  and has two copies of the allele for the recessive silver trait. We know he is homozygous also for non-lyretail since he doesn’t have a lyretail. Let’s assume you’ve had the green lyretail molly strain for enough generations without seeing any silvers to assume that all of those fish are homozygous for green color. By the way, since the lyretail allele in mollies is a dominant, you could have some heterozygous lyretail females. But, since you’ve had these fish for lots of generations and aren’t producing any non-lyretails, we’ll assume they are also homozygous lyretail.  In your first mating, the Punnett square will have only one cell because both parents are homozygous. The male will produce only one type of gamete (s/n) while the female also only produces one kind of gamete (G/Lt). The symbol “G” is for the dominant green allele, “s” is for the recessive silver color, “Lt” is for the dominant lyretail, and “n” is for the recessive normal tail.

Graphic of Punnet square for mating of silver molly to green lyretail molly.
Punnet square for mating of silver molly to green lyretail molly to produce F1 fish heterozygous for silver and lyretail alleles.

As you can see from above, when we mate your silver male to the female green lyretails all the F1 fish will be green lyretails. Why? This is because each fry will be heterozygous for the dominant lyretail and heterozygous for the recessive silver alleles.

When mating the F1s things get more interesting and your Punnett square will have 16 cells because each parent will produce four types of gametes as indicated in the next square. These gametes will randomly combine to form a number of genetic types (genotypes) and four types of fish (phenotypes) in a 9:3:3:1 ratio. On average out of 16 F2s nine will be green lyretails, three will be green non-lyretails, three will be silver lyretails (the desired fish), and one will be silver non-lyretail.

Graphic of Punnet square for F1 mating to procude sliver lyretail mollies.
Punnet square for F1 mating to produce silver lyretail mollies.

With the genetics behind us, let’s recap. You placed the male silver molly with the virgin female green lyretails. After about a month the first batches of fry were born. They were all green lyretails, but were heterozygous for both color and tail type. They are carrying the desired silver allele. With good food and warm temperatures, these fish will be sexable and ready to reproduce at about 3.5 months. There are two ways to go from here, I’d recommend doing both assuming your male silver molly is still alive and well. First, let’s assume you raised virgin F1 green lyretail females. It will simplify things. Pick the best 20 or so lyretail females. Ten of these will be placed with their father (by the way inbreeding does not deserve its bad reputation, so don’t hesitate to use it). The other ten are placed with the best F1 male green lyretail, their brother of half-brother.

From the daughters mated to their father you’ll yield 50% silvers and half of those will be lyretails. From the other mating you’ll yield 25% silvers and half of those silvers will be lyretails. It’s the silver lyretails you want.  When you mate these fish you’ll get only silver fish. At first, you’ll also get some non-lyretails. As each generation passes the percentage of non-lyretails will decline since by chance some of your breeders will be homozygous for lyretail. Time and chance will reduce the percentage of non-lyretails if you diligently select only lyretails for breeding. There is a method to speed this up by raising virgin females and doing test crosses to determine if they are homozygous, but it’s not really necessary.

Through this set of matings you either introduced silver, a recessive gene, to your green lyretail sailfin molly population; or you could look at is as having introduced the dominant lyretail gene to your silver sailfin molly population.

In a future blog we’ll look at additive or multiple genes.

Good fishkeeping!

Reader Interactions

Comments

  1. Kevin Fern says

    Very interesting! I am not educated in genetics but just enjoy trying different crossings of mollies. I have never seen a Gold Dust molly lyre tail sailfin and thought I would try it. I currently have 5 fry from a male golddust lyretail and female green sailfin. They are only a couple of weeks old, so dont know what they will look like. What crossing should I try nest to obtain the golddust lyertail sailfin?

    • Charles Clapsaddle says

      Kevin,

      A scientist’s knowledge of genetics is not required to develop new strains. Our ancestors did quite well at domesticating wild plants and animals and developing new varieties from them. In fact, I wrote an article for Tropical Fish Hobbyist magazine about this. See: http://www.tfhmagazine.com/details/articles/no-genetics-required.htm. You have a good start with that cross. If the male Gold Dust is homozygous for lyretail (a dominant gene), then all the offspring from that cross will be lyretail (see this blog g=for some information on lyretail in mollies: https://goliadfarms.com/fish-breeding-introducing-recessive-gene/). If he is heterozygous, then half the offspring will be lyretail. But, it’s important to know that female mollies can store sperm from earlier matings. So, if the green sailfin wasn’t a virgin when you put them together, her first batch of fry will likely not be your Gold Dust male’s. New sperm does tend to replace older, stored sperm, but even later batches of fry may contain fish that aren’t his. The good thin is that all lyretails will be his offspring. Once you get his offspring (likely to be ugly mottled fish) segregate any female lyretails with their father. Gold is a recessive gene. Mating him back to his daughters will yield some Gold lyretails. Gold Dust pattern involves other genes. Just keep mating him to his female offspring as long as he lives. You will lose the sailfin in this cross, but the genes for sailfin are there. Once you’ve set the Gold Dust pattern, select breeder males with the best dorsals and mate them to their sisters with the largest number of dorsal fin rays. You’ll eventually yield a Gold Dust Lyretail Sailfin molly.
      Charles

  2. Kevin Fern says

    Thanks for the info! I do know the female was a virgin as there were no males in the tank as she was maturing until I introduced the male. I will keep trying! Thanks again

  3. Chelsea says

    Is the sailfin a dominant trait? I have a trio of virgin green females and don’t want to loose the sail when breeding to a male. I’m expecting a shipment of silver sailfins and lyretails and am trying to decide what type of male to use on them.

    • Charles Clapsaddle says

      Chelsea, No, it is not a dominant trait. I think there are multiple genes involved. The F1 fish never have sailfins. The F2 sometimes have intermediate dorsals. If you mate the green sailfins to silver sailfins you should get some black freckled sailfins. Lyretail is inherited separately and is a dominant. Use silver sailfin lyretail males with your green sailfin females. The offspring will be green sailfins and green sailfin lyretails.

      • Chelsea says

        Hmm well now that they are here I have another few questions: how early can they breed? I’m not sure exactly how old my greens are. They were quite small when I got them in August. I would say they are about 3 inches long now.

        Which begs the other question: does it matter how big the male is? I have 3 that I think are nice enough to breed but one is enormous and really good looking. The medium one is more colorful but the big male keeps his sail up all the time and green is going to cancel the silver out anyway and big mollies would be awesome. He’s so big that I thought he was a white goldfish when I first opened the box! Lol

        The 3rd male is just a youngster about the same size as the females but has a pretty reddish stripe on the top of his sail. He doesn’t show it off much though. All came from Puerto Rico.

  4. Tracy says

    I acquired a femal black molly from a tank of black mollies…about 3 months later she finally birthed her fry. 9 out of 10 have survived and are now 3 weeks old. Several are dalmation, though one may be more harlequin, but the rest are a pale gold/orange. Two of the orange have a spot or two. She is in a tank with another female molly now (she is a newer addition) but we are anticipating she will have a few more clutches (I don’t know if that is the correct term). Just amazed at the colors, because I anticipated black fry given the tank she came from. Any ideas of the genetics that may be playing a part?

    • Charles Clapsaddle says

      Tracy,
      Clutch is as good a term as any. I usually say “batch.” Black in mollies is genetically complex. Near as I can tell, there are multiple genes and alleles involved. Basically it seems that a black fish must have a gene for black spotting and then a number of modifier genes to provide full black coverage. I have noticed that a black mollie mated to any other color will have a motley batch of fry. I suspect your female was exposed to non-black males, and maybe mated with several different males of various colors. Unless you place her with a black male, you can expect the same result from subsequent batches of fry. Female mollies, like most female Poeciliidae, store sperm from previous matings. New sperm does tend to outcompete stored sperm, so if you mate her to a black male you should get some black fry. Even if you mated a virgin female with a black male from another strain, you could get some non-black fry because the two strains might not have the same modifier genes.
      Charles

    • Charles Clapsaddle says

      Ralvin,

      Sorry about the tardy reply. Some messages got lost.
      We lost the Red Sailfin Molly line in the 2021 Texas Winter Storm. I’ll have to start from the beginning to develop one.
      Charles

  5. Liz S says

    Hey, hopefully you can help me figure this out. I’ve had some black mollys for quite some time and I’ve had a few offspring here and there survive, (I wasn’t actively trying to breed but I wasn’t going to stop it either) recently I got 2 silver lyretail females, both happened to be pregnant when I got them and they some silver fry.

    Recently my silvers had a new batch and I have no idea what they are. They’re a redish purple grey color, very silver belly, black stripe on the top fin, and most have between 1 and 4 black spots. I know they can store sperm but these fry dont look like anytjing ive seen. Does that sound like any kind you’ve seen? If so, what can I expect to see in my tank in the future?

    Thanks!

    • Charles Clapsaddle says

      Liz,
      I’m sorry for the tardy response. I just saw this message.
      Did you have them with your Black Mollies? If so, they are likely fathered by the Black Mollies. The silver color is recessive and the hybrids wouldn’t be silver. You can expect to see many more like that in the future.
      Charles

  6. Tom says

    which type of live bearers do you currently have available for sale ? Would love some sailfin mollies or wild type swords like Montezuma or Maye
    thanks Tom

    • Charles Clapsaddle says

      Tom, We should have Xiphophorus mayae aveilable soon. We will be processing mollies shortly. Email me at charles@goliadfarms.com, and I’ll add you to our new tickler file so I notify you when they are ready.
      Charles

  7. Ken says

    Hello, I am fascinated by all this. I am inspired to try to create gold sailfin lyretail mollies. I know where to get gold lyretails locally, and gold sailfin mollies online, and I think that’s where I should start?
    So, I’m guessing I need to start with a male gold sailfin and a female gold lyretail? I read in one of your responses that the F1s would all lose the sailfin? So then would I breed dad with his lyretail daughters? And granddaughters? Or was I supposed to use a silver sailfin? I’m not sure how to get the sailfin back, and I’m curious if there will be issues with color? Thanks!

    • Charles Clapsaddle says

      Ken, repeated backcrossing to sailfins will work, but you can also mate the F1s and select the F2s with the largest dorsals. The genes for sailfin are there. You just have to recombine them.
      Charles

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